Welcome to cancerstformer

cancerstformer is a Python library large language modeling of spatial transcriptomic datasets

Check out the Usage section for further information, including how to installation the project.

Note

This project is under active development.

Contents

Contents:

• Usage
  • Installation
  • Model Hub
  • Features
• API REFERENCE
  • Spatial Tokenize
  • Pretraining
  • Classification
  • In-Silico Perturbation
  • Gene Regulatory Network
• References
• Contributors
  • Authors
  • Maintainers
• Tutorial Notebooks
  • Pretrain and Create Model for Classification Based Tasks
  • In-Silico Perturbation
  • Pretain Hugging Face Dataset using Masked Learning Objective
  • Tokenization
  • Construct Gene Regulatory Network